Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | EZ449_19280 | Not Available | Positive | 4504152 - 4505423 | 47008.0 |
| helix-turn-helix domain-containing protein | EZ449_19285 | Not Available | Positive | 4506042 - 4506204 | 6403.88 |
| gdp-l-fucose synthase | EZ449_19290 | Not Available | Negative | 4507416 - 4508342 | 34796.8 |
| nucleotide sugar dehydrogenase | EZ449_19295 | Not Available | Positive | 4508664 - 4509947 | 47465.2 |
| hypothetical protein | EZ449_19300 | Not Available | Negative | 4510092 - 4510976 | 33592.9 |
| gdp-mannose 4,6-dehydratase | EZ449_19305 | Not Available | Positive | 4512205 - 4513341 | 42859.4 |
| histidinol phosphatase | EZ449_19310 | Not Available | Positive | 4513635 - 4514375 | 28262.1 |
| hypothetical protein | EZ449_19315 | Not Available | Positive | 4514553 - 4515359 | 29175.0 |
| polysaccharide biosynthesis tyrosine autokinase | EZ449_19320 | Not Available | Positive | 4515396 - 4517723 | 86883.3 |
| ferredoxin--nadp reductase | EZ449_19325 | Not Available | Positive | 4517726 - 4518757 | 38808.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

