Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl transferase | EZ449_19080 | Not Available | Positive | 4455077 - 4456060 | 36965.1 |
| transcriptional repressor | EZ449_19085 | Not Available | Negative | 4456046 - 4456501 | 16708.2 |
| tyrosine--trna ligase | EZ449_19090 | Not Available | Negative | 4456617 - 4457903 | 48031.4 |
| hypothetical protein | EZ449_19095 | Not Available | Negative | 4458161 - 4459555 | 52045.9 |
| duf479 domain-containing protein | EZ449_19100 | Not Available | Positive | 4459568 - 4460242 | 26044.7 |
| hypothetical protein | EZ449_19105 | Not Available | Positive | 4460278 - 4461777 | 56581.9 |
| nad-dependent dna ligase liga | EZ449_19110 | Not Available | Positive | 4461808 - 4463826 | 75931.1 |
| 4-hydroxy-tetrahydrodipicolinate synthase | EZ449_19115 | Not Available | Positive | 4463916 - 4464803 | 31727.1 |
| hypothetical protein | EZ449_19120 | Not Available | Negative | 4465155 - 4466204 | 39353.4 |
| histone h1 | EZ449_19125 | Not Available | Negative | 4466278 - 4466454 | 6498.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

