Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_19030 | Not Available | Positive | 4439704 - 4440165 | 17743.1 |
| crp/fnr family transcriptional regulator | EZ449_19035 | Not Available | Negative | 4440185 - 4440796 | 23156.2 |
| hypothetical protein | EZ449_19040 | Not Available | Positive | 4441413 - 4441751 | 12623.3 |
| tonb-dependent receptor | EZ449_19045 | Not Available | Positive | 4441810 - 4443999 | 82757.8 |
| hypothetical protein | EZ449_19050 | Not Available | Positive | 4444155 - 4444340 | 7063.63 |
| 1,4-alpha-glucan branching protein glgb | EZ449_19055 | Not Available | Negative | 4444461 - 4446425 | 75561.4 |
| duf4968 domain-containing protein | EZ449_19060 | Not Available | Negative | 4446484 - 4448946 | 96198.5 |
| tonb-dependent receptor | EZ449_19065 | Not Available | Negative | 4449178 - 4452063 | 104108.0 |
| penicillin acylase family protein | EZ449_19070 | Not Available | Positive | 4452262 - 4454691 | 92160.9 |
| hypothetical protein | EZ449_19075 | Not Available | Positive | 4454698 - 4455057 | 13268.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

