Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maoc family dehydratase | EZ449_18980 | Not Available | Positive | 4429508 - 4429966 | 17303.0 |
| riboflavin synthase | EZ449_18985 | Not Available | Negative | 4430038 - 4430622 | 21444.3 |
| acetyl-coa carboxylase biotin carboxylase subunit | EZ449_18990 | Not Available | Negative | 4430633 - 4432141 | 55378.4 |
| threonine aldolase | EZ449_18995 | Not Available | Negative | 4432167 - 4433189 | 37045.7 |
| n-acetylglucosamine kinase | EZ449_19000 | Not Available | Positive | 4433408 - 4434268 | 32067.9 |
| nudix hydrolase | EZ449_19005 | Not Available | Negative | 4434521 - 4435210 | 26772.7 |
| 6-phosphofructokinase | EZ449_19010 | Not Available | Positive | 4435322 - 4436308 | 34922.1 |
| hypothetical protein | EZ449_19015 | Not Available | Positive | 4436308 - 4437150 | 31516.2 |
| type i glyceraldehyde-3-phosphate dehydrogenase | EZ449_19020 | Not Available | Positive | 4437158 - 4438156 | 35536.5 |
| response regulator transcription factor | EZ449_19025 | Not Available | Negative | 4438918 - 4439283 | 13585.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

