Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1569 domain-containing protein | EZ449_18870 | Not Available | Positive | 4412160 - 4412612 | 17044.4 |
| hypothetical protein | EZ449_18875 | Not Available | Positive | 4412624 - 4413199 | 21762.3 |
| srpbcc domain-containing protein | EZ449_18880 | Not Available | Positive | 4413435 - 4413926 | 18923.2 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EZ449_18890 | Not Available | Positive | 4414714 - 4415565 | 31676.9 |
| metal-binding protein | EZ449_18895 | Not Available | Positive | 4415559 - 4415807 | 9648.05 |
| alpha-ketoglutarate-dependent dioxygenase alkb | EZ449_18900 | Not Available | Positive | 4415783 - 4416391 | 23291.8 |
| hypothetical protein | EZ449_18905 | Not Available | Negative | 4416410 - 4417201 | 29514.1 |
| dna-binding response regulator | EZ449_18910 | Not Available | Positive | 4417362 - 4417835 | 18150.7 |
| duf4199 domain-containing protein | EZ449_18915 | Not Available | Positive | 4417949 - 4418485 | 20144.2 |
| hypothetical protein | EZ449_18920 | Not Available | Positive | 4418599 - 4418940 | 12480.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

