Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | EZ449_18820 | Not Available | Positive | 4406384 - 4406842 | 17231.9 |
| arsr family transcriptional regulator | EZ449_18825 | Not Available | Positive | 4407098 - 4407418 | 12659.5 |
| srpbcc domain-containing protein | EZ449_18830 | Not Available | Positive | 4407415 - 4407912 | 19190.8 |
| voc family protein | EZ449_18835 | Not Available | Positive | 4407964 - 4408389 | 15574.3 |
| duf1349 domain-containing protein | EZ449_18840 | Not Available | Positive | 4408431 - 4409003 | 21388.5 |
| ketosteroid isomerase | EZ449_18845 | Not Available | Positive | 4409034 - 4409387 | 13534.9 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | EZ449_18850 | Not Available | Positive | 4409434 - 4409850 | 15866.2 |
| crp/fnr family transcriptional regulator | EZ449_18855 | Not Available | Positive | 4409937 - 4410506 | 21787.3 |
| sdr family nad(p)-dependent oxidoreductase | EZ449_18860 | Not Available | Positive | 4410583 - 4411320 | 26721.5 |
| yafy family transcriptional regulator | EZ449_18865 | Not Available | Positive | 4411394 - 4412086 | 26670.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

