Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | EZ449_18770 | Not Available | Positive | 4397545 - 4398864 | 48413.1 |
| hlyd family secretion protein | EZ449_18775 | Not Available | Positive | 4398873 - 4399952 | 38344.4 |
| dha2 family efflux mfs transporter permease subunit | EZ449_18780 | Not Available | Positive | 4399960 - 4401507 | 55972.4 |
| hypothetical protein | EZ449_18785 | Not Available | Negative | 4402071 - 4402299 | 8609.51 |
| hypothetical protein | EZ449_18790 | Not Available | Positive | 4402346 - 4402867 | 19675.2 |
| hypothetical protein | EZ449_18795 | Not Available | Positive | 4403041 - 4403898 | 32523.3 |
| hypothetical protein | EZ449_18800 | Not Available | Positive | 4404087 - 4404566 | 18683.7 |
| duf4272 domain-containing protein | EZ449_18805 | Not Available | Positive | 4404618 - 4405400 | 29654.1 |
| voc family protein | EZ449_18810 | Not Available | Positive | 4405578 - 4405958 | 14008.6 |
| eve domain-containing protein | EZ449_18815 | Not Available | Positive | 4405951 - 4406400 | 16968.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

