Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-alanyl-d-alanine carboxypeptidase | EZ449_01740 | Not Available | Positive | 418835 - 419893 | 39794.3 |
| sgnh/gdsl hydrolase family protein | EZ449_01745 | Not Available | Positive | 419927 - 420652 | 26189.2 |
| cd225/dispanin family protein | EZ449_01750 | Not Available | Positive | 420735 - 421079 | 12162.8 |
| duf2752 domain-containing protein | EZ449_01755 | Not Available | Positive | 421079 - 421474 | 15415.4 |
| duf2752 domain-containing protein | EZ449_01760 | Not Available | Positive | 421586 - 421969 | 14503.7 |
| hypothetical protein | EZ449_01765 | Not Available | Positive | 421966 - 422220 | 8747.57 |
| rdd family protein | EZ449_01770 | Not Available | Negative | 422245 - 422985 | 27261.4 |
| stage ii sporulation protein m | EZ449_01775 | Not Available | Positive | 423129 - 424082 | 35909.1 |
| hypothetical protein | EZ449_01780 | Not Available | Positive | 424084 - 424968 | 33644.0 |
| duf4129 domain-containing protein | EZ449_01785 | Not Available | Positive | 424970 - 425698 | 28675.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

