Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formyltetrahydrofolate deformylase | EZ449_18670 | Not Available | Negative | 4369820 - 4370659 | 31707.5 |
| dna recombination protein rmuc | EZ449_18675 | Not Available | Positive | 4370861 - 4372231 | 51984.1 |
| thiamine-phosphate kinase | EZ449_18680 | Not Available | Negative | 4373322 - 4374362 | 38233.7 |
| dicarboxylate/amino acid:cation symporter | EZ449_18685 | Not Available | Negative | 4374399 - 4375658 | 45005.2 |
| quinolinate synthase nada | EZ449_18690 | Not Available | Negative | 4375785 - 4376783 | 36992.9 |
| l-aspartate oxidase | EZ449_18695 | Not Available | Positive | 4377231 - 4378817 | 59615.2 |
| gamma carbonic anhydrase family protein | EZ449_18700 | Not Available | Positive | 4378877 - 4379398 | 18792.8 |
| hypothetical protein | EZ449_18705 | Not Available | Negative | 4379516 - 4381258 | 65777.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | EZ449_18710 | Not Available | Negative | 4381380 - 4383242 | 69021.1 |
| abc transporter atp-binding protein | EZ449_18715 | Not Available | Negative | 4383367 - 4385229 | 70754.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

