Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine synthase dusb | EZ449_18620 | Not Available | Negative | 4357482 - 4358489 | 37949.7 |
| cpbp family intramembrane metalloprotease | EZ449_18625 | Not Available | Positive | 4358534 - 4359460 | 35362.7 |
| hypothetical protein | EZ449_18630 | Not Available | Positive | 4359429 - 4359647 | 7974.45 |
| phosphatidate cytidylyltransferase | EZ449_18635 | Not Available | Positive | 4359696 - 4360505 | 30564.0 |
| acyl-coa thioesterase | EZ449_18640 | Not Available | Negative | 4361234 - 4361620 | 14348.3 |
| peptidase | EZ449_18645 | Not Available | Positive | 4361750 - 4364446 | 99973.8 |
| hypothetical protein | EZ449_18650 | Not Available | Negative | 4364498 - 4366465 | 73056.9 |
| dsba family oxidoreductase | EZ449_18655 | Not Available | Positive | 4366664 - 4367248 | 22300.4 |
| zinc metallopeptidase | EZ449_18660 | Not Available | Negative | 4367464 - 4368159 | 25521.1 |
| fad-binding oxidoreductase | EZ449_18665 | Not Available | Positive | 4368243 - 4369379 | 42118.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

