Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_18570 | Not Available | Positive | 4346238 - 4346882 | 24676.7 |
| ketoacyl-acp synthase iii | EZ449_18575 | Not Available | Positive | 4346955 - 4348034 | 39282.3 |
| tetratricopeptide repeat protein | EZ449_18580 | Not Available | Negative | 4348031 - 4349515 | 55830.3 |
| hypothetical protein | EZ449_18585 | Not Available | Negative | 4349680 - 4350426 | 28314.9 |
| nif3-like dinuclear metal center hexameric protein | EZ449_18590 | Not Available | Negative | 4350426 - 4351523 | 40986.2 |
| tm2 domain-containing protein | EZ449_18595 | Not Available | Negative | 4351914 - 4352291 | 13929.2 |
| duf2752 domain-containing protein | EZ449_18600 | Not Available | Negative | 4352297 - 4352599 | 11519.1 |
| transcription-repair coupling factor | EZ449_18605 | Not Available | Positive | 4352869 - 4356207 | 126409.0 |
| hypothetical protein | EZ449_18610 | Not Available | Positive | 4356352 - 4356573 | 8580.76 |
| co2+/mg2+ efflux protein apag | EZ449_18615 | Not Available | Negative | 4357059 - 4357445 | 14540.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

