Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | EZ449_18520 | Not Available | Negative | 4334413 - 4334985 | 20487.0 |
| 5'(3')-deoxyribonucleotidase | EZ449_18525 | Not Available | Positive | 4335150 - 4335650 | 19665.6 |
| duf2135 domain-containing protein | EZ449_18530 | Not Available | Negative | 4335898 - 4338981 | 115352.0 |
| heavy metal-binding domain-containing protein | EZ449_18535 | Not Available | Positive | 4339269 - 4339595 | 11287.6 |
| 6-phosphofructokinase | EZ449_18540 | Not Available | Negative | 4339648 - 4340631 | 35456.6 |
| duf255 domain-containing protein | EZ449_18545 | Not Available | Negative | 4340636 - 4342312 | 60985.8 |
| sugar transporter | EZ449_18550 | Not Available | Negative | 4342460 - 4342909 | 16894.6 |
| biotin--[acetyl-coa-carboxylase] ligase | EZ449_18555 | Not Available | Negative | 4342918 - 4343694 | 29021.0 |
| ribosome silencing factor | EZ449_18560 | Not Available | Positive | 4343739 - 4344113 | 14041.6 |
| atp-dependent zinc metalloprotease ftsh | EZ449_18565 | Not Available | Positive | 4344144 - 4346171 | 74053.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

