Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | EZ449_18470 | Not Available | Positive | 4325170 - 4327317 | 80071.7 |
| hypoxanthine phosphoribosyltransferase | EZ449_18475 | Not Available | Positive | 4327402 - 4327944 | 20195.6 |
| phosphatidylserine decarboxylase family protein | EZ449_18480 | Not Available | Positive | 4328001 - 4328660 | 24877.2 |
| mechanosensitive ion channel family protein | EZ449_18485 | Not Available | Negative | 4328830 - 4330002 | 44072.2 |
| 50s ribosomal protein l19 | EZ449_18490 | Not Available | Negative | 4330074 - 4330421 | 13046.9 |
| trna (guanosine(37)-n1)-methyltransferase trmd | EZ449_18495 | Not Available | Negative | 4330560 - 4331234 | 24988.9 |
| duf4488 domain-containing protein | EZ449_18500 | Not Available | Negative | 4331315 - 4331782 | 17475.0 |
| duf4419 domain-containing protein | EZ449_18505 | Not Available | Negative | 4331828 - 4333201 | 52371.0 |
| hypothetical protein | EZ449_18510 | Not Available | Negative | 4333285 - 4333719 | 16051.3 |
| 16s rrna processing protein rimm | EZ449_18515 | Not Available | Negative | 4333780 - 4334307 | 20227.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

