Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_18310 | Not Available | Negative | 4296148 - 4296468 | 11994.7 |
| duf3575 domain-containing protein | EZ449_18315 | Not Available | Negative | 4296465 - 4296878 | 15337.8 |
| holliday junction resolvase ruvx | EZ449_18320 | Not Available | Positive | 4297109 - 4297525 | 15719.1 |
| o-methyltransferase | EZ449_18325 | Not Available | Positive | 4297534 - 4298169 | 24061.2 |
| lysm peptidoglycan-binding domain-containing protein | EZ449_18330 | Not Available | Positive | 4298249 - 4298917 | 25359.3 |
| lysm peptidoglycan-binding domain-containing protein | EZ449_18335 | Not Available | Positive | 4298957 - 4299820 | 32909.1 |
| hypothetical protein | EZ449_18340 | Not Available | Positive | 4299869 - 4300621 | 28635.8 |
| hypothetical protein | EZ449_18345 | Not Available | Positive | 4300618 - 4300941 | 12826.8 |
| duf3078 domain-containing protein | EZ449_18350 | Not Available | Positive | 4301036 - 4302037 | 38196.6 |
| signal recognition particle protein | EZ449_18360 | Not Available | Positive | 4305053 - 4306393 | 48957.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

