Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromate efflux transporter | EZ449_18260 | Not Available | Positive | 4285199 - 4286416 | 44438.0 |
| port family protein | EZ449_18265 | Not Available | Positive | 4286492 - 4287115 | 23027.0 |
| cbs domain-containing protein | EZ449_18270 | Not Available | Negative | 4287186 - 4289093 | 73435.2 |
| 3'-5' exonuclease | EZ449_18275 | Not Available | Negative | 4289086 - 4289799 | 27550.6 |
| aquaporin family protein | EZ449_18280 | Not Available | Negative | 4290031 - 4290771 | 25730.0 |
| glycerol kinase | EZ449_18285 | Not Available | Negative | 4290836 - 4292326 | 54227.8 |
| glycerol-3-phosphate dehydrogenase/oxidase | EZ449_18290 | Not Available | Negative | 4292355 - 4293941 | 58545.1 |
| deor/glpr transcriptional regulator | EZ449_18295 | Not Available | Positive | 4294098 - 4294862 | 27974.0 |
| response regulator transcription factor | EZ449_18300 | Not Available | Positive | 4294907 - 4295299 | 14898.7 |
| hypothetical protein | EZ449_18305 | Not Available | Negative | 4295652 - 4295835 | 6962.47 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

