Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_18210 | Not Available | Positive | 4276283 - 4276783 | 16975.0 |
| hypothetical protein | EZ449_18215 | Not Available | Positive | 4276937 - 4277485 | 19574.6 |
| duf3347 domain-containing protein | EZ449_18220 | Not Available | Positive | 4277582 - 4278112 | 19298.2 |
| citrate synthase | EZ449_18225 | Not Available | Positive | 4278241 - 4279530 | 48540.4 |
| duf3667 domain-containing protein | EZ449_18230 | Not Available | Negative | 4279604 - 4280725 | 43637.2 |
| mfs transporter | EZ449_18235 | Not Available | Negative | 4280744 - 4282129 | 52047.2 |
| hypothetical protein | EZ449_18240 | Not Available | Negative | 4282311 - 4282925 | 22726.3 |
| electron transfer flavoprotein subunit alpha/fixb family protein | EZ449_18245 | Not Available | Negative | 4282980 - 4283948 | 33705.3 |
| electron transfer flavoprotein beta subunit/fixa family protein | EZ449_18250 | Not Available | Negative | 4284012 - 4284749 | 26268.5 |
| tetratricopeptide repeat protein | EZ449_18255 | Not Available | Positive | 4284812 - 4285147 | 12854.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

