Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family transcriptional regulator | EZ449_18160 | Not Available | Negative | 4262929 - 4263942 | 37991.6 |
| gfo/idh/moca family oxidoreductase | EZ449_18165 | Not Available | Positive | 4264106 - 4265458 | 50198.2 |
| sigma-70 family rna polymerase sigma factor | EZ449_18170 | Not Available | Positive | 4265702 - 4266289 | 22971.0 |
| fecr family protein | EZ449_18175 | Not Available | Positive | 4266449 - 4267603 | 43892.3 |
| susc/raga family tonb-linked outer membrane protein | EZ449_18180 | Not Available | Positive | 4267819 - 4271172 | 124872.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EZ449_18185 | Not Available | Positive | 4271192 - 4272748 | 58537.5 |
| mbl fold metallo-hydrolase | EZ449_18190 | Not Available | Positive | 4272879 - 4273973 | 41359.3 |
| hypothetical protein | EZ449_18195 | Not Available | Positive | 4274025 - 4274387 | 13578.9 |
| hypothetical protein | EZ449_18200 | Not Available | Positive | 4274445 - 4275236 | 30267.4 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | EZ449_18205 | Not Available | Positive | 4275237 - 4276172 | 35712.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

