Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | EZ449_18110 | Not Available | Negative | 4252698 - 4254968 | 85597.1 |
| ku protein | EZ449_18115 | Not Available | Positive | 4255105 - 4255872 | 29439.8 |
| steryl acetyl hydrolase | EZ449_18120 | Not Available | Negative | 4255968 - 4257086 | 39838.9 |
| stas/sec14 domain-containing protein | EZ449_18125 | Not Available | Positive | 4257231 - 4257599 | 13658.2 |
| mechanosensitive ion channel family protein | EZ449_18130 | Not Available | Positive | 4257782 - 4258588 | 29587.8 |
| response regulator transcription factor | EZ449_18135 | Not Available | Negative | 4258589 - 4258963 | 14048.1 |
| gaf domain-containing protein | EZ449_18140 | Not Available | Positive | 4259104 - 4261317 | 83634.5 |
| response regulator | EZ449_18145 | Not Available | Positive | 4261319 - 4261738 | 15738.9 |
| biliverdin-producing heme oxygenase | EZ449_18150 | Not Available | Positive | 4261824 - 4262408 | 21761.3 |
| histone h1 | EZ449_18155 | Not Available | Positive | 4262591 - 4262770 | 6411.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

