Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_18060 | Not Available | Positive | 4242900 - 4243493 | 22330.6 |
| abc transporter substrate-binding protein | EZ449_18065 | Not Available | Positive | 4243636 - 4244568 | 34597.0 |
| nad-dependent deacylase | EZ449_18070 | Not Available | Positive | 4244568 - 4245257 | 25584.5 |
| diphthine--ammonia ligase | EZ449_18075 | Not Available | Positive | 4245247 - 4245972 | 27657.5 |
| glycine zipper 2tm domain-containing protein | EZ449_18080 | Not Available | Positive | 4246101 - 4246607 | 17425.8 |
| dabb family protein | EZ449_18085 | Not Available | Positive | 4246702 - 4247037 | 12816.2 |
| homoserine dehydrogenase | EZ449_18090 | Not Available | Negative | 4247133 - 4248377 | 46530.6 |
| homoserine o-acetyltransferase | EZ449_18095 | Not Available | Negative | 4248552 - 4249646 | 40827.2 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | EZ449_18100 | Not Available | Negative | 4249694 - 4251013 | 47497.3 |
| hypothetical protein | EZ449_18105 | Not Available | Positive | 4251613 - 4252617 | 36424.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

