Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_18010 | Not Available | Negative | 4230164 - 4230676 | 19287.0 |
| hypothetical protein | EZ449_18015 | Not Available | Negative | 4230789 - 4231409 | 23640.7 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | EZ449_18020 | Not Available | Positive | 4231548 - 4233005 | 53704.3 |
| ahpc/tsa family protein | EZ449_18025 | Not Available | Positive | 4233005 - 4234117 | 41353.8 |
| response regulator transcription factor | EZ449_18030 | Not Available | Positive | 4234221 - 4234910 | 25905.5 |
| rna pseudouridine synthase | EZ449_18035 | Not Available | Positive | 4235173 - 4235895 | 27542.3 |
| chloride channel protein | EZ449_18040 | Not Available | Positive | 4235915 - 4237705 | 65914.6 |
| sigma-54-dependent fis family transcriptional regulator | EZ449_18045 | Not Available | Negative | 4237853 - 4239259 | 52162.6 |
| hypothetical protein | EZ449_18050 | Not Available | Negative | 4239374 - 4240618 | 48135.9 |
| tonb-dependent receptor | EZ449_18055 | Not Available | Positive | 4240993 - 4242861 | 68134.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

