Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_17855 | Not Available | Negative | 4194399 - 4195178 | 29298.6 |
| phoh family protein | EZ449_17860 | Not Available | Positive | 4195282 - 4196241 | 35183.9 |
| hypothetical protein | EZ449_17865 | Not Available | Positive | 4196416 - 4196694 | 10829.3 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | EZ449_17870 | Not Available | Positive | 4196807 - 4197751 | 35420.4 |
| anti-sigma factor antagonist | EZ449_17875 | Not Available | Positive | 4197795 - 4198172 | 13979.8 |
| ribonuclease z | EZ449_17880 | Not Available | Positive | 4198242 - 4199147 | 34707.7 |
| mce family protein | EZ449_17885 | Not Available | Negative | 4199331 - 4200284 | 34224.3 |
| n-acetylmuramoyl-l-alanine amidase | EZ449_17890 | Not Available | Negative | 4200465 - 4201241 | 28610.7 |
| n-acetylmuramoyl-l-alanine amidase | EZ449_17895 | Not Available | Negative | 4201253 - 4202116 | 32322.8 |
| lps-assembly protein lptd | EZ449_17900 | Not Available | Positive | 4202191 - 4204848 | 98529.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

