Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_17805 | Not Available | Positive | 4182550 - 4182744 | 7347.16 |
| 30s ribosomal protein s15 | EZ449_17810 | Not Available | Positive | 4183084 - 4183368 | 10935.5 |
| polyribonucleotide nucleotidyltransferase | EZ449_17815 | Not Available | Positive | 4183544 - 4185679 | 77350.2 |
| toxin-antitoxin system ywqk family antitoxin | EZ449_17820 | Not Available | Negative | 4185991 - 4186611 | 23869.2 |
| hypothetical protein | EZ449_17825 | Not Available | Positive | 4186694 - 4187290 | 22651.2 |
| ribulose-phosphate 3-epimerase | EZ449_17830 | Not Available | Positive | 4187484 - 4188155 | 24248.6 |
| tonb-dependent receptor | EZ449_17835 | Not Available | Positive | 4188303 - 4190723 | 91957.9 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | EZ449_17840 | Not Available | Positive | 4191333 - 4192406 | 39447.3 |
| 3-phosphoglycerate dehydrogenase | EZ449_17845 | Not Available | Positive | 4192481 - 4193428 | 33656.5 |
| hypothetical protein | EZ449_17850 | Not Available | Negative | 4193699 - 4194217 | 20010.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

