Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | EZ449_17750 | Not Available | Negative | 4170825 - 4172711 | 70392.3 |
| 7-carboxy-7-deazaguanine synthase quee | EZ449_17755 | Not Available | Negative | 4172750 - 4173373 | 23597.4 |
| rieske (2fe-2s) protein | EZ449_17760 | Not Available | Positive | 4173480 - 4173815 | 12667.9 |
| pin domain-containing protein | EZ449_17765 | Not Available | Negative | 4173918 - 4174337 | 15935.2 |
| hypothetical protein | EZ449_17770 | Not Available | Negative | 4174341 - 4174601 | 9767.57 |
| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase | EZ449_17775 | Not Available | Negative | 4174749 - 4175630 | 32083.1 |
| hypothetical protein | EZ449_17780 | Not Available | Negative | 4175654 - 4176580 | 35933.0 |
| elongation factor 4 | EZ449_17785 | Not Available | Negative | 4176590 - 4178377 | 66735.9 |
| mate family efflux transporter | EZ449_17795 | Not Available | Negative | 4180110 - 4181534 | 50764.3 |
| acyl-coa thioesterase | EZ449_17800 | Not Available | Negative | 4182049 - 4182468 | 16260.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

