Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | EZ449_17600 | Not Available | Negative | 4134342 - 4135658 | 48862.5 |
| protein translocase subunit secdf | EZ449_17605 | Not Available | Negative | 4136384 - 4139365 | 107314.0 |
| dihydrofolate reductase | EZ449_17610 | Not Available | Negative | 4139752 - 4140261 | 19207.8 |
| thymidylate synthase | EZ449_17615 | Not Available | Negative | 4140479 - 4141273 | 30179.1 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | EZ449_17620 | Not Available | Positive | 4141474 - 4142277 | 29704.7 |
| osmc family peroxiredoxin | EZ449_17625 | Not Available | Positive | 4142441 - 4142860 | 15412.7 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EZ449_17630 | Not Available | Positive | 4142931 - 4144103 | 43016.5 |
| pirin family protein | EZ449_17635 | Not Available | Positive | 4144283 - 4145005 | 26553.2 |
| hypothetical protein | EZ449_17640 | Not Available | Positive | 4145272 - 4145568 | 10832.5 |
| lapa family protein | EZ449_17645 | Not Available | Negative | 4145907 - 4146185 | 10195.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

