Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1343 domain-containing protein | EZ449_17500 | Not Available | Negative | 4115072 - 4116340 | 47224.4 |
| abc transporter permease | EZ449_17505 | Not Available | Positive | 4116509 - 4117729 | 46045.2 |
| trna pseudouridine synthase a | EZ449_17510 | Not Available | Negative | 4117912 - 4118712 | 30745.1 |
| hypothetical protein | EZ449_17515 | Not Available | Positive | 4118795 - 4119169 | 14239.8 |
| atp-binding protein | EZ449_17520 | Not Available | Negative | 4119164 - 4120288 | 43425.3 |
| hypothetical protein | EZ449_17525 | Not Available | Negative | 4120360 - 4120812 | 16914.0 |
| restriction endonuclease | EZ449_17530 | Not Available | Negative | 4120815 - 4121693 | 33014.6 |
| nucleoside triphosphate pyrophosphohydrolase | EZ449_17535 | Not Available | Negative | 4121712 - 4122518 | 30739.4 |
| hypothetical protein | EZ449_17540 | Not Available | Negative | 4122984 - 4123280 | 10959.7 |
| ai-2e family transporter | EZ449_17545 | Not Available | Negative | 4123283 - 4124392 | 41354.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

