Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | EZ449_17450 | Not Available | Positive | 4105776 - 4106522 | 27440.9 |
| hypothetical protein | EZ449_17455 | Not Available | Positive | 4106523 - 4107332 | 31271.3 |
| peptide-methionine (s)-s-oxide reductase | EZ449_17460 | Not Available | Positive | 4107578 - 4108069 | 18526.6 |
| pyridoxal-phosphate dependent enzyme | EZ449_17465 | Not Available | Negative | 4108271 - 4109140 | 32146.0 |
| hypothetical protein | EZ449_17470 | Not Available | Negative | 4109203 - 4110231 | 36604.2 |
| rlua family pseudouridine synthase | EZ449_17475 | Not Available | Positive | 4110325 - 4111353 | 38993.7 |
| 4-amino-4-deoxychorismate lyase | EZ449_17480 | Not Available | Positive | 4111357 - 4112199 | 31777.6 |
| methionyl-trna formyltransferase | EZ449_17485 | Not Available | Negative | 4112633 - 4113541 | 33463.7 |
| dna topoisomerase ib | EZ449_17490 | Not Available | Positive | 4113634 - 4114677 | 39674.9 |
| hypothetical protein | EZ449_17495 | Not Available | Negative | 4114754 - 4115002 | 9157.72 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

