Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_17400 | Not Available | Positive | 4095608 - 4096438 | 31164.2 |
| hypothetical protein | EZ449_17405 | Not Available | Positive | 4096470 - 4096889 | 16324.6 |
| hypothetical protein | EZ449_17410 | Not Available | Positive | 4097005 - 4098135 | 42957.0 |
| hypothetical protein | EZ449_17415 | Not Available | Positive | 4098065 - 4098508 | 16940.8 |
| tautomerase | EZ449_17420 | Not Available | Negative | 4098518 - 4098913 | 14878.9 |
| class ii fumarate hydratase | EZ449_17425 | Not Available | Positive | 4099079 - 4100512 | 51745.9 |
| porin | EZ449_17430 | Not Available | Positive | 4100457 - 4101701 | 46904.9 |
| anion permease | EZ449_17435 | Not Available | Positive | 4101712 - 4103142 | 51336.5 |
| succinate dehydrogenase cytochrome b subunit | EZ449_17440 | Not Available | Positive | 4103212 - 4103844 | 24111.1 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | EZ449_17445 | Not Available | Positive | 4103844 - 4105754 | 70834.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

