Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bacillithiol biosynthesis deacetylase bshb1 | EZ449_17350 | Not Available | Positive | 4082494 - 4083210 | 26988.4 |
| acyl-coa dehydrogenase | EZ449_17355 | Not Available | Positive | 4083456 - 4084820 | 50389.1 |
| hypothetical protein | EZ449_17360 | Not Available | Negative | 4085211 - 4085612 | 15380.9 |
| l-lysine 6-transaminase | EZ449_17365 | Not Available | Negative | 4085615 - 4086946 | 50211.3 |
| universal stress protein | EZ449_17370 | Not Available | Positive | 4087297 - 4088169 | 32588.7 |
| response regulator | EZ449_17375 | Not Available | Negative | 4088192 - 4089244 | 39857.3 |
| pas domain s-box protein | EZ449_17380 | Not Available | Negative | 4089219 - 4090436 | 45477.5 |
| phosphoketolase family protein | EZ449_17385 | Not Available | Positive | 4090688 - 4093048 | 88699.2 |
| bon domain-containing protein | EZ449_17390 | Not Available | Positive | 4093087 - 4093503 | 15751.3 |
| alpha-glucan family phosphorylase | EZ449_17395 | Not Available | Positive | 4093815 - 4095470 | 62951.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

