Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1080 domain-containing protein | EZ449_17250 | Not Available | Negative | 4061947 - 4062777 | 30973.9 |
| (d)cmp kinase | EZ449_17255 | Not Available | Negative | 4062838 - 4063515 | 25458.2 |
| ferritin | EZ449_17260 | Not Available | Positive | 4063638 - 4064162 | 20050.8 |
| aminoacyl-trna hydrolase | EZ449_17265 | Not Available | Positive | 4064203 - 4064613 | 15571.1 |
| lipid a deacylase lpxr family protein | EZ449_17270 | Not Available | Negative | 4064677 - 4065624 | 35669.1 |
| endopeptidase la | EZ449_17275 | Not Available | Negative | 4065708 - 4068179 | 92165.9 |
| tetratricopeptide repeat protein | EZ449_17280 | Not Available | Positive | 4068489 - 4069109 | 23611.4 |
| hypothetical protein | EZ449_17285 | Not Available | Negative | 4069159 - 4069686 | 20524.9 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | EZ449_17290 | Not Available | Negative | 4069686 - 4071209 | 55846.2 |
| duf4783 domain-containing protein | EZ449_17295 | Not Available | Positive | 4071383 - 4071781 | 15136.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

