Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | EZ449_17200 | Not Available | Negative | 4050766 - 4052271 | 55121.6 |
| arac family transcriptional regulator | EZ449_17205 | Not Available | Positive | 4052604 - 4053530 | 35369.6 |
| beta-n-acetylhexosaminidase | EZ449_17210 | Not Available | Negative | 4053527 - 4055194 | 64138.3 |
| 30s ribosomal protein s1 | EZ449_17215 | Not Available | Negative | 4055640 - 4057574 | 71466.0 |
| hypothetical protein | EZ449_17220 | Not Available | Negative | 4057965 - 4058294 | 12346.1 |
| hypothetical protein | EZ449_17225 | Not Available | Negative | 4058284 - 4058490 | 7593.41 |
| sh3 domain-containing protein | EZ449_17230 | Not Available | Negative | 4058517 - 4059497 | 36002.2 |
| hypothetical protein | EZ449_17235 | Not Available | Negative | 4059620 - 4060009 | 15179.2 |
| hypothetical protein | EZ449_17240 | Not Available | Negative | 4060103 - 4060357 | 9603.64 |
| tpm domain-containing protein | EZ449_17245 | Not Available | Negative | 4060398 - 4061891 | 55781.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

