Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase | EZ449_01590 | Not Available | Negative | 383028 - 384167 | 41738.1 |
| flippase-like domain-containing protein | EZ449_01595 | Not Available | Negative | 384353 - 385333 | 37057.7 |
| aspartate 1-decarboxylase | EZ449_01600 | Not Available | Negative | 385338 - 385688 | 12769.6 |
| pantoate--beta-alanine ligase | EZ449_01605 | Not Available | Negative | 385797 - 386642 | 31317.1 |
| starch synthase | EZ449_01610 | Not Available | Positive | 386786 - 387616 | 31732.0 |
| duf4270 domain-containing protein | EZ449_01615 | Not Available | Positive | 387639 - 389060 | 50903.6 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | EZ449_01620 | Not Available | Positive | 389205 - 391043 | 67724.1 |
| single-stranded dna-binding protein | EZ449_01625 | Not Available | Negative | 391185 - 391628 | 16526.6 |
| a/g-specific adenine glycosylase | EZ449_01630 | Not Available | Negative | 391684 - 392745 | 40992.1 |
| integration host factor subunit beta | EZ449_01635 | Not Available | Positive | 392914 - 393216 | 11077.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

