Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | EZ449_17150 | Not Available | Negative | 4040222 - 4040623 | 14784.3 |
| mota/tolq/exbb proton channel family protein | EZ449_17155 | Not Available | Negative | 4040623 - 4041327 | 25608.1 |
| spor domain-containing protein | EZ449_17160 | Not Available | Negative | 4041327 - 4042805 | 55894.9 |
| hypothetical protein | EZ449_17165 | Not Available | Negative | 4042860 - 4044557 | 63313.0 |
| tetratricopeptide repeat protein | EZ449_17170 | Not Available | Negative | 4044562 - 4047585 | 115610.0 |
| aspartate carbamoyltransferase catalytic subunit | EZ449_17175 | Not Available | Negative | 4047832 - 4048761 | 34300.0 |
| bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase pyrr | EZ449_17180 | Not Available | Negative | 4048765 - 4049325 | 21270.8 |
| duf393 domain-containing protein | EZ449_17185 | Not Available | Positive | 4049572 - 4049973 | 15504.0 |
| hypothetical protein | EZ449_17190 | Not Available | Negative | 4050005 - 4050208 | 7793.76 |
| duf779 domain-containing protein | EZ449_17195 | Not Available | Negative | 4050330 - 4050704 | 14495.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

