Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding protein | EZ449_17085 | Not Available | Positive | 4025169 - 4026710 | 56387.0 |
| hypothetical protein | EZ449_17090 | Not Available | Positive | 4026743 - 4027210 | 17496.5 |
| coa-binding protein | EZ449_17095 | Not Available | Positive | 4027408 - 4027767 | 13555.3 |
| acyloxyacyl hydrolase | EZ449_17100 | Not Available | Negative | 4027764 - 4028948 | 44100.7 |
| lipid a deacylase lpxr family protein | EZ449_17105 | Not Available | Negative | 4028875 - 4029834 | 35363.9 |
| acyl-acp desaturase | EZ449_17125 | Not Available | Positive | 4031702 - 4032682 | 37886.4 |
| methylmalonyl-coa mutase | EZ449_17130 | Not Available | Negative | 4032786 - 4036157 | 125905.0 |
| alkaline phosphatase family protein | EZ449_17135 | Not Available | Negative | 4036339 - 4037997 | 61536.7 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | EZ449_17140 | Not Available | Negative | 4038067 - 4039311 | 45671.4 |
| energy transducer tonb | EZ449_17145 | Not Available | Negative | 4039389 - 4040222 | 29271.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

