Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | EZ449_16985 | Not Available | Positive | 4005678 - 4006526 | 32095.9 |
| fatty acid desaturase | EZ449_16990 | Not Available | Positive | 4006599 - 4007273 | 26770.4 |
| ferrochelatase | EZ449_16995 | Not Available | Positive | 4007689 - 4008699 | 38030.9 |
| gluconokinase | EZ449_17000 | Not Available | Positive | 4008708 - 4009214 | 18605.4 |
| 3-deoxy-d-manno-octulosonic acid transferase | EZ449_17005 | Not Available | Negative | 4009198 - 4010418 | 46260.7 |
| udp-glucose/gdp-mannose dehydrogenase family protein | EZ449_17010 | Not Available | Positive | 4010568 - 4011881 | 48394.5 |
| sdr family oxidoreductase | EZ449_17015 | Not Available | Positive | 4011941 - 4012969 | 38852.6 |
| udp-glucose 4-epimerase gale | EZ449_17020 | Not Available | Positive | 4012971 - 4013993 | 37367.3 |
| hypothetical protein | EZ449_17025 | Not Available | Positive | 4013994 - 4014551 | 21487.3 |
| capsular biosynthesis protein | EZ449_17030 | Not Available | Positive | 4014568 - 4015305 | 27959.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

