Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | EZ449_16935 | Not Available | Positive | 3997582 - 3998760 | 44243.8 |
| doxx family protein | EZ449_16940 | Not Available | Negative | 3998751 - 3999209 | 16869.1 |
| phenylalanyl-trna synthetase subunit alpha | EZ449_16945 | Not Available | Positive | 3999425 - 3999535 | 4336.17 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | EZ449_16950 | Not Available | Positive | 3999689 - 4001101 | 53545.0 |
| hypothetical protein | EZ449_16955 | Not Available | Positive | 4001234 - 4001641 | 15520.6 |
| duf2807 domain-containing protein | EZ449_16960 | Not Available | Negative | 4001771 - 4002475 | 24577.8 |
| phosphoribosyltransferase | EZ449_16965 | Not Available | Positive | 4002605 - 4003111 | 19163.6 |
| glycerol acyltransferase | EZ449_16970 | Not Available | Positive | 4003304 - 4003927 | 24369.2 |
| glycosyltransferase family 2 protein | EZ449_16975 | Not Available | Positive | 4003924 - 4005021 | 41698.9 |
| carotenoid biosynthesis protein | EZ449_16980 | Not Available | Positive | 4004991 - 4005665 | 25579.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

