Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4190 domain-containing protein | EZ449_16885 | Not Available | Positive | 3987931 - 3988404 | 16812.5 |
| brxa/brxb family bacilliredoxin | EZ449_16890 | Not Available | Positive | 3988501 - 3988911 | 14962.1 |
| tigr00159 family protein | EZ449_16895 | Not Available | Negative | 3988995 - 3989786 | 29839.1 |
| dihydropteroate synthase | EZ449_16900 | Not Available | Negative | 3989869 - 3990720 | 31312.3 |
| duf1599 domain-containing protein | EZ449_16905 | Not Available | Positive | 3990820 - 3991365 | 20773.1 |
| doxx family protein | EZ449_16910 | Not Available | Positive | 3991365 - 3992516 | 43241.2 |
| abc transporter permease | EZ449_16915 | Not Available | Positive | 3992516 - 3993571 | 38993.4 |
| shikimate kinase | EZ449_16920 | Not Available | Positive | 3993649 - 3994191 | 20228.3 |
| phytoene desaturase | EZ449_16925 | Not Available | Negative | 3994192 - 3995655 | 55073.6 |
| m28 family peptidase | EZ449_16930 | Not Available | Negative | 3995658 - 3997361 | 63121.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

