Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_16780 | Not Available | Negative | 3962527 - 3962907 | 14639.0 |
| cbs domain-containing protein | EZ449_16785 | Not Available | Negative | 3962986 - 3963414 | 15913.6 |
| adenosylhomocysteinase | EZ449_16790 | Not Available | Positive | 3963733 - 3965049 | 48172.7 |
| hypothetical protein | EZ449_16795 | Not Available | Positive | 3965362 - 3965700 | 12186.8 |
| gtra family protein | EZ449_16805 | Not Available | Negative | 3967022 - 3967402 | 14631.2 |
| glycosyl transferase | EZ449_16810 | Not Available | Negative | 3967404 - 3969044 | 62916.0 |
| pyridoxine 5'-phosphate synthase | EZ449_16815 | Not Available | Positive | 3969128 - 3969844 | 26601.6 |
| eama family transporter | EZ449_16820 | Not Available | Positive | 3969970 - 3970860 | 32246.1 |
| hypothetical protein | EZ449_16825 | Not Available | Positive | 3971010 - 3971573 | 20990.4 |
| glycine dehydrogenase (aminomethyl-transferring) | EZ449_16830 | Not Available | Positive | 3972113 - 3974989 | 104955.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

