Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,2-fucosyltransferase | EZ449_01540 | Not Available | Positive | 371761 - 372618 | 33473.0 |
| glycosyltransferase | EZ449_01545 | Not Available | Positive | 372618 - 373622 | 39043.1 |
| acyltransferase | EZ449_01550 | Not Available | Negative | 373619 - 374710 | 42646.5 |
| duf268 domain-containing protein | EZ449_01555 | Not Available | Positive | 374895 - 375638 | 28227.1 |
| atp-binding protein | EZ449_01560 | Not Available | Negative | 375718 - 376950 | 47634.3 |
| translation initiation factor if-2 | EZ449_01565 | Not Available | Negative | 377123 - 380203 | 110789.0 |
| transcription termination/antitermination protein nusa | EZ449_01570 | Not Available | Negative | 380265 - 381509 | 46944.7 |
| ribosome assembly cofactor rimp | EZ449_01575 | Not Available | Negative | 381574 - 382038 | 17267.9 |
| hypothetical protein | EZ449_01580 | Not Available | Negative | 382160 - 382591 | 15800.5 |
| phage holin family protein | EZ449_01585 | Not Available | Positive | 382609 - 382953 | 12049.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

