Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_16525 | Not Available | Negative | 3909852 - 3910394 | 20643.5 |
| transcriptional regulator | EZ449_16530 | Not Available | Negative | 3911586 - 3911792 | 7681.23 |
| hypothetical protein | EZ449_16535 | Not Available | Negative | 3912490 - 3913107 | 23182.8 |
| rna polymerase sigma factor | EZ449_16540 | Not Available | Negative | 3913112 - 3913615 | 20130.2 |
| anti-sigma factor | EZ449_16545 | Not Available | Negative | 3914439 - 3915296 | 31392.7 |
| sigma-70 family rna polymerase sigma factor | EZ449_16550 | Not Available | Negative | 3915299 - 3915850 | 20987.5 |
| lipoyl synthase | EZ449_16555 | Not Available | Negative | 3915964 - 3916857 | 33308.4 |
| cysteine--trna ligase | EZ449_16560 | Not Available | Positive | 3917447 - 3918907 | 54958.6 |
| m28 family peptidase | EZ449_16565 | Not Available | Positive | 3918963 - 3919943 | 36196.4 |
| nuclear transport factor 2 family protein | EZ449_16570 | Not Available | Positive | 3920024 - 3920881 | 31320.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

