Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication/repair protein recf | EZ449_16425 | Not Available | Positive | 3888798 - 3889901 | 42843.8 |
| duf721 domain-containing protein | EZ449_16430 | Not Available | Positive | 3889894 - 3890184 | 11197.0 |
| hypothetical protein | EZ449_16435 | Not Available | Negative | 3890420 - 3890923 | 19001.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | EZ449_16440 | Not Available | Negative | 3891251 - 3892021 | 27549.2 |
| nucleoside-diphosphate kinase | EZ449_16445 | Not Available | Negative | 3892151 - 3892570 | 15267.9 |
| bifunctional oligoribonuclease/pap phosphatase nrna | EZ449_16450 | Not Available | Positive | 3892687 - 3893697 | 37242.2 |
| peptidylprolyl isomerase | EZ449_16455 | Not Available | Positive | 3893741 - 3894730 | 35713.2 |
| peptidylprolyl isomerase | EZ449_16460 | Not Available | Positive | 3894954 - 3895925 | 35368.8 |
| sh3 domain-containing protein | EZ449_16465 | Not Available | Negative | 3895992 - 3896414 | 15237.7 |
| bon domain-containing protein | EZ449_16470 | Not Available | Negative | 3896422 - 3896865 | 15330.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

