Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase | EZ449_16375 | Not Available | Negative | 3877311 - 3879608 | 87261.9 |
| duf493 family protein | EZ449_16380 | Not Available | Positive | 3880282 - 3880593 | 11628.0 |
| hypothetical protein | EZ449_16385 | Not Available | Negative | 3880854 - 3882368 | 57492.0 |
| ph domain-containing protein | EZ449_16390 | Not Available | Negative | 3882365 - 3882907 | 20221.9 |
| t9ss type a sorting domain-containing protein | EZ449_16395 | Not Available | Negative | 3882965 - 3883954 | 36491.2 |
| dipeptidase | EZ449_16400 | Not Available | Positive | 3884153 - 3885523 | 50459.0 |
| hypothetical protein | EZ449_16405 | Not Available | Positive | 3886151 - 3886360 | 7975.76 |
| aminoacyl-trna hydrolase | EZ449_16410 | Not Available | Positive | 3886720 - 3887280 | 20669.2 |
| tetratricopeptide repeat protein | EZ449_16415 | Not Available | Negative | 3887497 - 3888162 | 24214.8 |
| hypothetical protein | EZ449_16420 | Not Available | Negative | 3888285 - 3888692 | 15327.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

