Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | EZ449_16325 | Not Available | Positive | 3864907 - 3865683 | 27747.4 |
| siroheme synthase | EZ449_16330 | Not Available | Positive | 3865667 - 3867178 | 54722.0 |
| phosphoadenylyl-sulfate reductase | EZ449_16335 | Not Available | Positive | 3867181 - 3867894 | 27776.9 |
| sulfate adenylyltransferase subunit cysd | EZ449_16340 | Not Available | Positive | 3868338 - 3869243 | 34480.9 |
| sulfate adenylyltransferase | EZ449_16345 | Not Available | Positive | 3869315 - 3870565 | 46425.4 |
| multidrug transporter | EZ449_16350 | Not Available | Positive | 3871068 - 3872078 | 38858.9 |
| hypothetical protein | EZ449_16355 | Not Available | Positive | 3872154 - 3872618 | 17024.6 |
| uroporphyrinogen-iii c-methyltransferase | EZ449_16360 | Not Available | Positive | 3873028 - 3873822 | 28628.3 |
| glycogen synthase | EZ449_16365 | Not Available | Positive | 3874165 - 3875577 | 53216.7 |
| glucose-1-phosphate adenylyltransferase | EZ449_16370 | Not Available | Positive | 3875586 - 3876854 | 46904.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

