Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1543 domain-containing protein | EZ449_16275 | Not Available | Negative | 3852740 - 3853300 | 21306.6 |
| hypothetical protein | EZ449_16280 | Not Available | Positive | 3853531 - 3855240 | 64630.7 |
| hypothetical protein | EZ449_16285 | Not Available | Positive | 3855525 - 3857033 | 56751.5 |
| hypothetical protein | EZ449_16290 | Not Available | Positive | 3857056 - 3857373 | 12266.0 |
| m23 family metallopeptidase | EZ449_16295 | Not Available | Negative | 3857390 - 3858016 | 24036.1 |
| metallophosphoesterase | EZ449_16300 | Not Available | Negative | 3858198 - 3859229 | 38868.9 |
| response regulator | EZ449_16305 | Not Available | Negative | 3859514 - 3861145 | 61219.2 |
| rrf2 family transcriptional regulator | EZ449_16310 | Not Available | Positive | 3861425 - 3861871 | 16355.2 |
| hypothetical protein | EZ449_16315 | Not Available | Negative | 3862042 - 3862596 | 20788.0 |
| hepn domain-containing protein | EZ449_16320 | Not Available | Positive | 3862814 - 3864904 | 78211.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

