Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_16225 | Not Available | Positive | 3830364 - 3832175 | 66330.0 |
| hypothetical protein | EZ449_16230 | Not Available | Positive | 3832224 - 3833660 | 53271.9 |
| susc/raga family tonb-linked outer membrane protein | EZ449_16235 | Not Available | Positive | 3833690 - 3836938 | 118741.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_16240 | Not Available | Positive | 3836963 - 3838717 | 65853.7 |
| beta-xylosidase | EZ449_16245 | Not Available | Negative | 3839337 - 3841001 | 62878.1 |
| beta-xylosidase | EZ449_16250 | Not Available | Negative | 3841098 - 3842708 | 60447.5 |
| glycoside hydrolase family 2 protein | EZ449_16255 | Not Available | Negative | 3842770 - 3845724 | 109365.0 |
| glycosyl hydrolase | EZ449_16260 | Not Available | Negative | 3845740 - 3846738 | 38568.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_16265 | Not Available | Negative | 3847030 - 3849000 | 73909.6 |
| tonb-dependent receptor | EZ449_16270 | Not Available | Negative | 3849012 - 3852236 | 117475.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

