Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhamnogalacturonan acetylesterase | EZ449_16175 | Not Available | Positive | 3808746 - 3809540 | 29226.1 |
| beta-glucuronidase | EZ449_16180 | Not Available | Positive | 3810352 - 3813258 | 109526.0 |
| glycoside hydrolase family 88 protein | EZ449_16185 | Not Available | Positive | 3813391 - 3814515 | 42909.4 |
| hypothetical protein | EZ449_16190 | Not Available | Positive | 3814519 - 3817029 | 94169.9 |
| glycoside hydrolase family 31 protein | EZ449_16195 | Not Available | Positive | 3817031 - 3819460 | 91837.6 |
| l-rhamnose mutarotase | EZ449_16200 | Not Available | Positive | 3819939 - 3820247 | 11754.0 |
| glycoside hydrolase | EZ449_16205 | Not Available | Positive | 3820253 - 3823021 | 103619.0 |
| hypothetical protein | EZ449_16210 | Not Available | Positive | 3823380 - 3825602 | 82040.5 |
| susc/raga family tonb-linked outer membrane protein | EZ449_16215 | Not Available | Positive | 3825608 - 3828859 | 120364.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_16220 | Not Available | Positive | 3828871 - 3830355 | 55920.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

