Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | EZ449_01490 | Not Available | Negative | 360352 - 360732 | 13701.4 |
| ompa family protein | EZ449_01495 | Not Available | Negative | 360982 - 362328 | 47640.7 |
| aminopeptidase p family protein | EZ449_01500 | Not Available | Positive | 362501 - 363790 | 49459.8 |
| methylmalonyl co-a mutase-associated gtpase meab | EZ449_01505 | Not Available | Negative | 363849 - 364739 | 32582.4 |
| glycosyltransferase family 2 protein | EZ449_01510 | Not Available | Positive | 364835 - 365713 | 34557.4 |
| glycosyltransferase family 2 protein | EZ449_01515 | Not Available | Positive | 365714 - 366700 | 38580.1 |
| abc transporter atp-binding protein | EZ449_01520 | Not Available | Positive | 366831 - 368666 | 67661.3 |
| hypothetical protein | EZ449_01525 | Not Available | Positive | 368670 - 369500 | 32295.8 |
| glycosyltransferase | EZ449_01530 | Not Available | Positive | 369497 - 370429 | 36079.2 |
| glycosyltransferase | EZ449_01535 | Not Available | Negative | 370465 - 371592 | 42526.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

