Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2271 domain-containing protein | EZ449_16025 | Not Available | Positive | 3765329 - 3765814 | 18139.9 |
| fad-binding oxidoreductase | EZ449_16030 | Not Available | Positive | 3765829 - 3768021 | 82238.2 |
| fad:protein fmn transferase | EZ449_16035 | Not Available | Negative | 3768043 - 3768942 | 32450.4 |
| sigma-70 family rna polymerase sigma factor | EZ449_16040 | Not Available | Negative | 3769128 - 3769715 | 22129.8 |
| response regulator | EZ449_16045 | Not Available | Negative | 3769848 - 3770210 | 13184.0 |
| divalent metal cation transporter | EZ449_16050 | Not Available | Negative | 3770389 - 3771570 | 41216.8 |
| 5-oxoprolinase subunit pxpa | EZ449_16055 | Not Available | Negative | 3771567 - 3772328 | 27682.4 |
| biotin-dependent carboxyltransferase family protein | EZ449_16060 | Not Available | Negative | 3772340 - 3773329 | 35609.1 |
| 5-oxoprolinase subunit pxpb | EZ449_16065 | Not Available | Negative | 3773319 - 3774071 | 27438.1 |
| hypothetical protein | EZ449_16070 | Not Available | Negative | 3774244 - 3774474 | 8847.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

