Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | EZ449_15925 | Not Available | Positive | 3743564 - 3744265 | 26498.1 |
| metallophosphoesterase | EZ449_15930 | Not Available | Positive | 3744438 - 3744929 | 18361.1 |
| class 1 fructose-bisphosphatase | EZ449_15935 | Not Available | Positive | 3744952 - 3746028 | 39256.3 |
| ribonuclease hi | EZ449_15940 | Not Available | Negative | 3746025 - 3746498 | 17980.6 |
| Trna-his | Not Available | Not Available | Positive | 3746675 - 3746751 | Not Available |
| response regulator transcription factor | EZ449_15950 | Not Available | Negative | 3747081 - 3747788 | 26637.9 |
| hypothetical protein | EZ449_15955 | Not Available | Negative | 3747791 - 3748867 | 41529.5 |
| tonb-dependent receptor | EZ449_15960 | Not Available | Positive | 3749059 - 3751380 | 86268.1 |
| duf4249 domain-containing protein | EZ449_15965 | Not Available | Positive | 3751391 - 3752209 | 28669.1 |
| crp/fnr family transcriptional regulator | EZ449_15970 | Not Available | Positive | 3752731 - 3753294 | 21909.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

