Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EZ449_15875 | Not Available | Positive | 3723302 - 3725968 | 99252.5 |
| rna polymerase sigma-70 factor | EZ449_15880 | Not Available | Positive | 3726273 - 3726860 | 22615.4 |
| fecr family protein | EZ449_15885 | Not Available | Positive | 3726960 - 3728081 | 41963.0 |
| susc/raga family tonb-linked outer membrane protein | EZ449_15890 | Not Available | Positive | 3728238 - 3731642 | 124817.0 |
| ragb/susd family nutrient uptake outer membrane protein | EZ449_15895 | Not Available | Positive | 3731653 - 3733041 | 51289.4 |
| tlpa family protein disulfide reductase | EZ449_15900 | Not Available | Positive | 3733066 - 3735042 | 76319.2 |
| glutamine synthetase type iii | EZ449_15905 | Not Available | Negative | 3735735 - 3737909 | 81047.1 |
| energy transducer tonb | EZ449_15910 | Not Available | Positive | 3738113 - 3738955 | 30522.7 |
| phosphoribosylformylglycinamidine synthase | EZ449_15915 | Not Available | Negative | 3739233 - 3742895 | 134123.0 |
| voc family protein | EZ449_15920 | Not Available | Positive | 3743101 - 3743493 | 14970.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

