Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter frigidisoli |
| Strain | strain RP-3-11 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1653740 bp
Thymine Count
1643646 bp
Guanine Count
977966 bp
Cytosine Count
998159 bp
Genome Length
5273566 bp
Protein-coding Genes
4365 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coce/nond family hydrolase | EZ449_15825 | Not Available | Positive | 3711114 - 3712871 | 65779.0 |
| hypothetical protein | EZ449_15830 | Not Available | Negative | 3713180 - 3713443 | 9959.11 |
| hypothetical protein | EZ449_15835 | Not Available | Negative | 3713539 - 3713739 | 7551.22 |
| hypothetical protein | EZ449_15840 | Not Available | Negative | 3713752 - 3713982 | 8888.53 |
| hypothetical protein | EZ449_15845 | Not Available | Negative | 3714056 - 3714385 | 12640.3 |
| hypothetical protein | EZ449_15850 | Not Available | Negative | 3714525 - 3716594 | 76675.1 |
| tonb-dependent receptor | EZ449_15855 | Not Available | Positive | 3717773 - 3720106 | 86795.5 |
| duf4249 domain-containing protein | EZ449_15860 | Not Available | Positive | 3720120 - 3720908 | 28661.7 |
| histidine kinase | EZ449_15865 | Not Available | Positive | 3720990 - 3722051 | 40662.2 |
| response regulator transcription factor | EZ449_15870 | Not Available | Positive | 3722048 - 3722776 | 27754.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

